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| Title and Version |
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BioSeqAnalyzer v1.0
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| Author |
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BioSeqAnalyzer
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| Release Date |
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31 December 2005
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| Operating Systems |
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Windows2000,WinXP
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| Short Description |
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align and analyze dna and protein sequences. windows interface
makes sequence analysis extremely easy. bioseqanalyzer,
registered version, supports the following operations:
scoring alignment.
linear global alignment.
affine global alignment.
local alignment.
multiple alignment.
hidden markov models profiles.
aligning to hidden markov models profiles.
composition-based classification.
profile-based classification.
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| PAD File URL |
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http://www.bsqan.com/anonymous/bsqan.xml |
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| Application Web Page |
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http://www.bsqan.com
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| Author Web Page |
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http://www.bsqan.com
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| Keywords |
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bioinformatics, biotechnology, sequence analysis, BioSeqAnalyzer, Hidden Markov Models, alignment, global alignment, affine alig
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| Full Description |
|
BioSeqAnalyzer is a bioinformatics software tool for analyzing DNA and protein sequences.
Its Windows interface makes sequence analysis extremely easy.
BioSeqAnalyzer, registered version, supports the following
operations:
Alignment Scoring.
Linear global alignment.
Affine global alignment.
Local alignment.
Multiple alignment.
Hidden Markov Models Profile creation.
Aligning to Hidden Markov Models Profiles.
Composition-based classification.
Profile-based classification.
All functions can be performed on both DNA and protein sequences.
BioSeqAnalyzer brings to sequence analysis the following GUI features:
Enter sequences either from the keyboard or from FASTA files.
Select a FASTA file from a list of previously-used files.
Select a sequence from within a multi-sequence FASTA file using a simple listbox.
Select substitution score matrix with a single click.
View alignments in either wide, or wrap-around format.
View or hide Dynamic Programming matrices.
Create and save HMM profiles.
Align sequences to a previous-saved HMM profiles.
Much more.
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